Deeptools
NGS analysis toolkit.
/deeptoolsK-Dense-AI/scientific-agent-skills
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- Validate BibValidate bibliography entries against citations in all source files.
- Alloc ProfileAnalyze a jemalloc (or other) allocation profile in collapsed stack format.
- DossierResearches a company, person, or topic into a dossier that tests its hypotheses.
- GEO Brand MentionsScans how AI and search engines mention and rate your brand.
- Genomic CoordinatesConvert genomic intervals between coordinate conventions, normalise and compare variant.
- OpenpivExtracts velocity fields from PIV image pairs for flow analysis.
- Pkpd ModelingPharmacokinetic and pharmacodynamic modelling and simulation - non-compartmental.
- Pydeseq2Performs differential gene expression analysis using DESeq2 methodology.